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Faculty Bibliography

Alphabetical list of publications by fulltime RowanSOM faculty. SOM and GSBS students, staff and volunteer faculty are included in New Publications only

Letter T

Letter V

Venkateswar Venkataraman
Assistant Professor
Cell Biology

Wang F, Wu H, Venkataraman V, Hu X. Silk fibroin-poly(lactic acid) biocomposites: Effect of protein-synthetic polymer interactions and miscibility on material properties and biological responses. Materials Science & Engineering. C, Materials for Biological Applications. 2019 Nov;104:109890. Epub 2019 Jun 15. doi: 10.1016/j.msec.2019.109890. PMID: 31500018.
Osypenko DS, Dovgan AV, Kononenko NI, Dromaretsky AV, Matvieienko M, Rybachuk OA, Zhang J, Korogod SM, Venkataraman V, Belan P. Perturbed Ca2+-dependent signaling of DYT2 hippocalcin mutant as mechanism of autosomal recessive dystonia. Neurobiology of Disease.  2019 Jul 10:104529. doi: 10.1016/j.nbd.2019.104529. PMID: 31301343. [Epub ahead of print]
Yang Y, Krishnan A, Viviano J, Venkataraman V. Unraveling the Dynamics of the EF1 Hand Upon Ca2+ Binding in Neurocalcin Delta. Biophysical Journal. 2015;108(2):380A-A. WOS:000362849400322.
Viviano J, Wu H, Venkataraman V. Evolutionary Interrelationships and Insights into Molecular Mechanisms of Functional Divergence: An Analysis of Neuronal Calcium Sensor Proteins. J Phylogen Evolution Biol 2013;1(117). doi: 10.4172/2329-9002.1000117.
Wen XH, Duda T, Pertzev A, Venkataraman V, Makino CL, Sharma RK. S100B Serves as a Ca Sensor for ROS-GC1 Guanylate Cyclase in Cones but not in Rods of the Murine Retina. Cell Physiol Biochem. 2012;29(3-4):417-30. Epub 2012 Apr 3. PubMed PMID: 22508049.
Nagele RG, Clifford PM, Siu G, Levin EC, Acharya NK, Han M, Kosciuk MC, Venkataraman V, Zavareh S, Zarrabi S, Kinsler K, Thaker NG, Nagele EP, Dash J, Wang HY, Levitas A. Brain-reactive autoantibodies prevalent in human sera increase intraneuronal amyloid-β(1-42) deposition. J Alzheimers Dis. 2011;25(4):605-22. PubMed PMID: 21483091. 
Levin EC, Acharya NK, Han M, Zavareh SB, Sedeyn JC, Venkataraman V, Nagele RG. Brain-reactive autoantibodies are nearly ubiquitous in human sera and may be linked to pathology in the context of blood-brain barrier breakdown. Brain Res. 2010 Jul 23;1345C:221-232.
Gilliss AC, Swanson RL 3rd, Janora D, Venkataraman VUse of osteopathic manipulative treatment to manage compensated trendelenburg gait caused by sacroiliac somatic dysfunction. J Am Osteopath Assoc. 2010 Feb;110(2):81-6. 
Levin EC, Acharya NK, Sedeyn JC, Venkataraman V, D'Andrea MR, Wang HY, Nagele RG. Neuronal expression of vimentin in the Alzheimer's disease brain may be part of a generalized dendritic damage-response mechanism. Brain Res. 2009 Nov17;1298:194-207. 
Ragunath C, Manuel SG, Venkataraman V, Sait HB, Kasinathan C, Ramasubbu N. Probing the role of aromatic residues at the secondary saccharide-binding sites of human salivary alpha-amylase in substrate hydrolysis and bacterial binding. J Mol Biol. 2008 Dec 31;384(5):1232-48. Epub 2008 Oct 14.
Clifford PM, Siu G, Kosciuk M, Levin EC, Venkataraman V, D'Andrea MR, Nagele RG. alpha7 nicotinic acetylcholine receptor expression by vascular smooth muscle cells facilitates the deposition of Abeta peptides and promotes cerebrovascular amyloid angiopathy. Brain Res. 2008 Oct 9;1234:158-71
Venkataraman V, Duda T, Ravichandran S, Sharma RK. Neurocalcin δ modulation of ROS-GC1, a new model of Ca2+ signaling.Biochemistry 2008;47(25):6590-6601
Clifford PM, Zarrabi S, Siu G, Kinsler KJ, Kosciuk MC, Venkataraman V, D'Andrea MR, Dinsmore S, Nagele RG.  Abeta peptides can enter the brain through a defective blood-brain barrier and bind selectively to neurons. Brain Res. 2007 Apr 20;1142:223-36.
Duda T, Venkataraman V, Ravichandran S, Sharma RK. ATP-regulated module (ARM) of the atrial natriuretic factor receptor guanylate cyclase. Peptides. Jun 2005;26(6):969-984. 
Duda T, Fik-Rymarkiewicz E, Venkataraman V, Krishnan R, Koch KW, Sharma RK. The calcium-sensor guanylate cyclase activating protein type 2 specific site in rod outer segment membrane guanylate cyclase type 1. Biochemistry. May 17 2005;44(19):7336-7345. 
Viviano J, Krishnan A, Wu H, Venkataraman VElectrophoretic Mobility Shift in Native Gels Indicates Calcium-dependent Structural Changes of Neuronal Calcium Sensor Proteins. Anal Biochem. 2015 Nov 23. pii: S0003-2697(15)00531-X. doi:10.1016/j.ab.2015.11.005. [Epub ahead of print] PubMed PMID: 26617128.
Viviano J, Krishnan A, Wu H, Venkataraman V. Electrophoretic mobility shift in native gels indicates calcium-dependent structural changes of neuronal calcium sensor proteins. Anal Biochem. 2016 Feb 1;494:93-100. doi: 10.1016/j.ab.2015.11.005. Epub 2015 Nov 23. PubMed PMID: 26617128.
Sedeyn JC, Wu H, Hobbs RD, Levin EC, Nagele RG, Venkataraman VHistamine Induces Alzheimer's Disease-Like Blood Brain Barrier Breach and Local Cellular Responses in Mouse Brain Organotypic Cultures. Biomed Res Int. 2015;2015:937148.  doi: 10.1155/2015/937148. Epub 2015 Nov 30. PubMed PMID: 26697497; PubMed Central PMCID: PMC4677161.
Viviano J, Wu H, Krishnan A, Ramanujachary K, Venkataraman V. Data on final calcium concentration in native gel reagents determined accurately through inductively coupled plasma measurements. Data Brief. 2016 Jan 29;6:820-2. doi: 10.1016/j.dib.2016.01.030. eCollection 2016 Mar. PubMed PMID: 26937454; PubMed Central PMCID: PMC4749937.
Krishnan A, Viviano J, Morozov Y, Venkataraman V. Single-Column Purification of the Tag-free,  Recombinant Form of the Neuronal Calcium Sensor Protein, Hippocalcin Expressed in E. coli. Protein Expr Purif. 2016 Mar 18. pii:S1046-5928(16)30040-7. doi: 10.1016/j.pep.2016.03.005. [Epub ahead of print] PubMed PMID: 27001424.
Wu H, Brown EV, Acharya NK, Appelt DM, Marks A, Nagele RG, Venkataraman VAge-dependent increase of blood–brain barrier permeability and  neuron-binding autoantibodies in S100B knockout mice.  Brain Research. 2016 Apr 15;1637:154-67. doi: 10.1016/j.brainres.2016.02.026. Epub 2016 Feb 22. PubMed PMID:  26907191.
Krishnan A, Viviano J, Morozov Y, Venkataraman V. Single-column purification of the tag-free, recombinant form of the neuronal calcium sensor protein, hippocalcin expressed in Escherichia coli. Protein Expr Purif. 2016 Jul;123:35-41. Epub 2016 Mar 19. doi: 10.1016/j.pep.2016.03.005.PMID: 27001424.
Viviano J, Krishnan A, Scully J, Wu H, Venkataraman VDatasets depicting mobility retardation of NCS proteins observed upon incubation with calcium, but not with magnesium, barium or strontium. Data Brief. 2016 Apr 21;7:1606-8. eCollection 2016. doi: 10.1016/j.dib.2016.04.035. PMID: 27222862. PMCID: PMC4865663.
Krishnan A, Viviano J, Morozov Y, Venkataraman V. Data on the Identity and Myristoylation State of Recombinant, Purified Hippocalcin. ​Data Brief 2016 Sept;8: 78-81 doi:10.1016/j.dib.2016.04.024 PMID: 27284566 PMCID: PMC4887589
Acharya NK, Qi X, Goldwaser EL, Godsey GA, Wu H, Kosciuk MC, Freeman TA, Macphee CH, Wilensky RL, Venkataraman V, Nagele RG. Retinal pathology is associated with increased blood-retina barrier permeability in a diabetic and hypercholesterolaemic pig model: Beneficial effects of the LpPLA2 inhibitor Darapladib. Diabetes and Vascular Disease Research.  2017 Mar 1:1479164116683149. doi: 10.1177/1479164116683149. PMID: 28301218. [Epub ahead of print]
Wu H, Rodriguez AR, Spur BW, Venkataraman VAn Acute Retinal Model for Evaluating Blood Retinal Barrier Breach and Potential Drugs for Treatment. Journal of Visualized Experiments (JoVE), 2016 Sep 13;(115). DOI: 10.3791/54619. PMID: 27684428.
Acharya NK, Qi X, Goldwaser EL, Godsey GA, Wu H, Kosciuk MC, Freeman TA, Macphee CH, Wilensky RL, Venkataraman V, Nagele RG. Retinal pathology is associated with increased blood-retina barrier permeability in a diabetic and hypercholesterolaemic pig model: Beneficial effects of the LpPLA2 inhibitor Darapladib. Diabetes and Vascular Disease Research.  2017 May;14(3):200-213. doi: Epub 2017 Mar 1.doi: 10.1177/1479164116683149. PMID: 28301218.
Wang F, Jyothirmayee Aravind SS, Wu H, Forys J, Venkataraman V, Ramanujachary K, Hu X. Tunable green graphene-silk biomaterials: Mechanism of protein-based nanocomposites. Materials Science & Engineering: C. 2017 Oct 1;79:728-739. Epub 2017 May 17. doi: 10.1016/j.msec.2017.05.120. PMID: 28629074.

Meagan Vermeulen, MD, FAAFP
Assistant Professor
Family Medicine

Haugh JA, Herbert K, Choi S, Petrides J, Vermeulen MW, D'Onofrio J. Acceptability of the stepped care model of depression treatment in primary care patients and providersJournal of Clinical Psychology in Medical Settings. 2019 Jan 22. doi: 10.1007/s10880-019-09599-2. PMID: 30671915.  [Epub ahead of print]
Petrides J, Collins P, Kowalski A, Sepede J, Vermeulen M. Lifestyle changes for disease prevention. Primary Care: Clinics in Office Practice. 2019 Mar;46(1):1-12. Epub 2018 Dec 22. doi: 10.1016/j.pop.2018.10.003. PMID: 30704651.

Letter W

Barry Waterhouse, PhD
Cell Biology

Prouty EW, Chandler DJ, Gao WJ, Waterhouse BD. Selective vulnerability of dorsal raphe-medial prefrontal cortex projection neurons to corticosterone-induced hypofunction. European Journal of Neuroscience. 2019 Jul;50(1):1712-1726. Epub 2019 Feb 15. doi: 10.1111/ejn.14355. PMID: 30687960.
Marshall CA, Brodnik ZD, Mortensen OV, Reith MEA, Shumsky JS, Waterhouse BD, España RA, Kortagere S. Selective activation of dopamine D3 receptors and norepinephrine transporter blockade enhances sustained attention. Neuropharmacology. 2019 Jan 8;148:178-188. doi: 10.1016/j.neuropharm.2019.01.003. PMID: 30633928. PMCID: PMC6424628. [Available on 2020-04-01]
Waterhouse BD, Navarra RL. The locus coeruleus-norepinephrine system and sensory signal processing: A historical review and current perspectivesBrain Research. 2018 Sep 1. pii: S0006-8993(18)30454-2. doi: 10.1016/j.brainres.2018.08.032. PMID: 30179606.
PMCID: PMC6139556.
Navarra RL, Waterhouse BDConsidering noradrenergically mediated facilitation of sensory signal processing as a component of psychostimulant-induced performance enhancementBrain Research. 2018 Jun 21. [Epub ahead of print] doi: 10.1016/j.brainres.2018.06.027. PMID: 29935154.
Navarra R, Waterhouse B. "What have we GANEd?" A theoretical construct to explain experimental evidence for noradrenergic regulation of sensory signal processing. Behavioral & Brain Sciences. 2016 Jan;39:e219. doi: 10.1017/S0140525X15001909. PMID: 28347394.
Prouty EW, Waterhouse BD, Chandler DJ.  Corticotropin releasing factor dose‐dependently modulates excitatory synaptic transmission in the noradrenergic nucleus locus coeruleus. European Journal of Neuroscience. 2017 Mar;45(5):712-722. Epub 2017 Jan 4. doi: 10.1111/ejn.13501. PMID:  27973694.
Navarra RL, Clark BD, Gargiulo AT, Waterhouse BD. Methylphenidate Enhances Early-Stage Sensory Processing and Rodent Performance of a Visual Signal Detection Task. Neuropsychopharmacology. 2017 May;42(6):1326-1337.  Epub 2016 Dec 2. doi: 10.1038/npp.2016.267. PMID: 27910862. PMCID: PMC5437885.
Prouty EW, Chandler DJ, Waterhouse BDNeurochemical differences between target-specific populations of rat dorsal raphe projection neurons. Brain Research. 2017 Nov 15;1675:28-40. Epub 2017 Sep 1. doi: 10.1016/j.brainres.2017.08.031. PMID: 28867482.

Brian Weiser, PhD
Assistant Professor
Molecular Biology

Weiser BP
, Rodriguez G, Cole PA, Stivers JT. N-terminal domain of human uracil DNA glycosylase (hUNG2) promotes targeting to uracil sites adjacent to ssDNA-dsDNA junctions. Nucleic Acids Research. 2018 Aug 21;46(14):7169-7178. doi: 10.1093/nar/gky525. PMID: 29917162. PMCID: PMC6101581.

Letter Y

Kingsley E. Yin, PhD 
Associate Professor
Cell Biology

Thornton  JM, Libreros  S, Walker  J, Spur B, Rodriguez A,  Serhan CN, Yin K. Lipoxin α4 reduces pseudomonas virulence and increases leukocyte phagocytosis [Poster 46]. Shock. 2019 Jun;51(6_S1):64.
Yin K, Walker J, Sochacki K, Spur B, Rodriguez A. Effects of resolvin D2 in 2-hit model of sepsis (P149). Shock.  2018 Jun 1;49(6S):103. doi: 10.1097/SHK.0000000000001158. [Conference Abstract]
Ochoa-Alvarez JA, Krishnan H, Pastorino JG, Nevel E, Kephart D, Lee JJ, Retzbach EP, Shen Y, Fatahzadeh M, Baredes S, Kalyoussef E, Honma M, Adelson ME,  Kaneko MK, Kato Y, Young MA, Deluca-Rapone L, Shienbaum AJ, Yin K, Jensen LD, Goldberg GS. Antibody and lectin target podoplanin to inhibit oral squamous carcinoma cell migration and viability by distinct mechanisms. Oncotarget. 2015 Mar 10. [Epub ahead of print] PubMed PMID: 25826087.
Wu B, Walker J, Spur B, Rodriguez A, Yin K. Effects of Lipoxin A(4) on antimicrobial actions of neutrophils in sepsis. Prostaglandins Leukot Essent Fatty Acids. 2014 Nov 21. pii: S0952-3278(14)00196-3. doi:10.1016/j.plefa.2014.11.005. [Epub ahead of print] PubMed PMID: 25476955.
Walker J, Dichter E, Lacorte G, Kerner D, Spur B, Rodriguez A, Yin KLipoxin a4 increases survival by decreasing systemic inflammation and bacterial load in sepsis. Shock. 2011 Oct;36(4):410-6. PubMed PMID: 21701419. 
Yue G, Shi G, Azaro MA, Yang Q, Hu G, Luo M, Yin K, Nagele RG, Fine DH, Yang JM, Li H.  Lipopolysaccharide (LPS) potentiates hydrogen peroxide toxicity in T98G astrocytoma cells by suppression of anti-oxidative and growth factor gene expression.  BMC Genomics. 2008 Dec 16;9:608.
Pahuja M, Tran C, Wang H, Yin K. Alveolar Macrophage Suppression In Sepsis Is Associated With High Mobility Group Box 1 Transmigration. Shock. 2007 8; [Epub ahead of print] 
Yin K, Gribbin E, Emanuel S, Orndorff R, Walker J, Weese J, Fallahnejad M.  Histochemical alterations in one lung ventilation. J Surg Res. 2007 Jan;137(1):16-20.
Yin K, Gribbin E, Wang H. Interferon-gamma inhibition attenuates lethality after cecal ligation and puncture in rats: implication of high mobility group box-1. Shock. 2005 Oct;24(4):396-401. 
Wang C, Kuzma M, Qiu G, Yin KHeterogenous and compartment-specific activation of nonlymphocytic, mononuclear cells in intraabdominal sepsis. Exp Lung Res. Oct-Nov 2003;29(7):503-521. 
Qiu G, Gribbin E, Harrison K, Sinha N, Yin KInhibition of gamma interferon decreases bacterial load in peritonitis by accelerating peritoneal fibrin deposition and tissue repair. Infect Immun. May 2003;71(5):2766-2774.
Wu B, Capilato J, Pham MP, Walker J, Spur B, Rodriguez A, Perez LJ, Yin KLipoxin A4 augments host defense in sepsis and reduces Pseudomonas aeruginosa virulence through quorum sensing inhibition. FASEB J. 2016 Mar 10. pii: fj.201500029R. [Epub ahead of print] PubMed PMID: 26965685. 
Wu B, Capilato J, Pham MP, Walker J, Spur B, Rodriguez A, Perez LJ, Yin KLipoxin A4 augments host defense in sepsis and reduces Pseudomonas aeruginosa virulence through quorum sensing inhibition. FASEB Journal. 2016 Jun;30(6):2400-10. PMID: 26965685 doi: 10.1096/fj.201500029R.
Retzbach EP, Krishnan H, Ochoa-Alvarez JA, Shen Y, Nevel E, Kephart DJ, Kalyoussef E, Baredes S, Fatahzadeh M, Yin K, Shienbaum AJ, Kato Y, Jensen L, Goldberg GS. Podoplanin's diverse potential as a chemotherapeutic target for oral squamous cell carcinom [abstract]. In: Proceedings of the American Association for Cancer Research Annual Meeting 2017; 2017 Apr 1-5; Washington, DC. Philadelphia (PA): AACR; Cancer Res 2017;77(13 Suppl):Abstract nr 968. doi:10.1158/1538-7445.AM2017-968.

Wu B, Walker J, Spur B, Rodriguez A, Yin K. Lipoxin A4 promotes blood bacteria clearance in sepsis by increasing neutrophil hagocytosis and apoptosis. Shock. 2014;41:79.
Yin K, Gribbin E, Wang H, Inhibition of IFN-gamma attenuates lethality after CLP: Implication of HMGB1. Shock. Jun 2005;23:49-50 Suppl. 3.
Yin K, Gribbin E.  Role of IFN-gamma in tissue repair, bacterial load and organ injury after CLP. Shock. 2004;21:21-21 60 Suppl. 2
Yin K, Walker J, Spur B, Rodriguez A, Xue P. Lipoxin A4 attenuates immunosuprression in CLP-sepsis
Shock. 2016 June 1;(45):6(131-132) [Meeting Abstract] WOS:000377692000321.
Walker J, Spur B, Rodriguez A, Yin K. Beneficial Effects of Reslovin D2 on Infection Resolution. Shock. 2017 Jun;47(6, S1):37. [Meeting Abstract].

Letter Z